Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Gm6916-202ENSMUST00000205523 195 ntBASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim47Q8C0E3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim47Q8C0E3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim47Q8C0E3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms