Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 PRYP5-201ENST00000451909 266 ntBASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 SART3-203ENST00000546611 1184 ntBASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 AL773604.1-201ENST00000617417 272 ntBASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 AL022326.1-202ENST00000641533 845 ntBASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC39BQ5VTQ0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 RPS2P28-201ENST00000314255 741 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC018712.1-201ENST00000455767 687 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC009078.2-202ENST00000463353 338 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 RNPS1P1-201ENST00000507437 918 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 NKAPP1-205ENST00000585790 367 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 AC022211.2-201ENST00000585075 2527 ntBASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC39BQ5VTQ0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 CROCCP2-202ENST00000412962 2773 ntBASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 STK19B-204ENST00000512515 211 ntBASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TTC39BQ5VTQ0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms