Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Gm37230-201ENSMUST00000194491 818 ntBASIC16.9■□□□□ 0.3
Smc3Q9CW03 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc3Q9CW03 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc3Q9CW03 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.89■□□□□ 0.3
Smc3Q9CW03 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc3Q9CW03 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.89■□□□□ 0.3
Smc3Q9CW03 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Smc3Q9CW03 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.89■□□□□ 0.29
Smc3Q9CW03 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Gm9385-201ENSMUST00000117563 472 ntBASIC16.89■□□□□ 0.29
Smc3Q9CW03 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc3Q9CW03 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.88■□□□□ 0.29
Smc3Q9CW03 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.88■□□□□ 0.29
Smc3Q9CW03 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc3Q9CW03 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Gm5479-201ENSMUST00000160578 435 ntBASIC16.87■□□□□ 0.29
Smc3Q9CW03 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc3Q9CW03 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms