Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mrpl54Q9CPW3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Gm6623-201ENSMUST00000173570 544 ntBASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl54Q9CPW3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl54Q9CPW3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Gm22697-201ENSMUST00000175194 63 ntBASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Olfr286-202ENSMUST00000205305 969 ntBASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl54Q9CPW3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms