Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.91■□□□□ 0.3
Col20a1Q923P0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Gm5745-201ENSMUST00000183748 313 ntBASIC16.91■□□□□ 0.3
Col20a1Q923P0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.91■□□□□ 0.3
Col20a1Q923P0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col20a1Q923P0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.9■□□□□ 0.3
Col20a1Q923P0 Gm10766-202ENSMUST00000194123 606 ntBASIC16.9■□□□□ 0.3
Col20a1Q923P0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col20a1Q923P0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col20a1Q923P0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col20a1Q923P0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col20a1Q923P0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.89■□□□□ 0.29
Col20a1Q923P0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.89■□□□□ 0.29
Col20a1Q923P0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.89■□□□□ 0.29
Col20a1Q923P0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.89■□□□□ 0.29
Col20a1Q923P0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.89■□□□□ 0.29
Col20a1Q923P0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col20a1Q923P0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.88■□□□□ 0.29
Col20a1Q923P0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.88■□□□□ 0.29
Col20a1Q923P0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms