Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Mir6977-201ENSMUST00000184960 64 ntBASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ndc1Q8VCB1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Gm14767-201ENSMUST00000121559 586 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Gm27533-201ENSMUST00000183800 152 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Mir8102-201ENSMUST00000184148 139 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.55□□□□□ -0.24
Ndc1Q8VCB1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms