Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam43aQ8BUP8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam43aQ8BUP8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam43aQ8BUP8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Gm4899-201ENSMUST00000178708 719 ntBASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Gm9682-201ENSMUST00000197505 556 ntBASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Fam43aQ8BUP8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam43aQ8BUP8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Gm45743-201ENSMUST00000212701 2795 ntBASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Fam43aQ8BUP8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Gm10499-201ENSMUST00000174094 934 ntBASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Gm44771-201ENSMUST00000206975 626 ntBASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fam43aQ8BUP8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam43aQ8BUP8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam43aQ8BUP8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fam43aQ8BUP8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fam43aQ8BUP8 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms