Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Six3Q62233 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Six3Q62233 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.04□□□□□ -0.16
Six3Q62233 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six3Q62233 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six3Q62233 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Six3Q62233 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.03□□□□□ -0.16
Six3Q62233 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.03□□□□□ -0.16
Six3Q62233 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Gm27920-201ENSMUST00000183953 96 ntBASIC14.03□□□□□ -0.16
Six3Q62233 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six3Q62233 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Six3Q62233 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.03□□□□□ -0.16
Six3Q62233 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six3Q62233 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Six3Q62233 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Six3Q62233 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six3Q62233 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Six3Q62233 Gm12260-201ENSMUST00000122447 411 ntBASIC14.02□□□□□ -0.17
Six3Q62233 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Six3Q62233 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.02□□□□□ -0.17
Six3Q62233 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.02□□□□□ -0.17
Six3Q62233 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Six3Q62233 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Six3Q62233 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six3Q62233 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six3Q62233 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.01□□□□□ -0.17
Six3Q62233 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms