Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccne1Q61457 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccne1Q61457 Gm15240-201ENSMUST00000118156 720 ntBASIC18.59■□□□□ 0.57
Ccne1Q61457 Gm37714-201ENSMUST00000194742 342 ntBASIC18.59■□□□□ 0.57
Ccne1Q61457 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.59■□□□□ 0.57
Ccne1Q61457 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.59■□□□□ 0.57
Ccne1Q61457 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccne1Q61457 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.59■□□□□ 0.57
Ccne1Q61457 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ccne1Q61457 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccne1Q61457 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccne1Q61457 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccne1Q61457 Gm15824-201ENSMUST00000119516 955 ntBASIC18.58■□□□□ 0.56
Ccne1Q61457 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccne1Q61457 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccne1Q61457 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.58■□□□□ 0.56
Ccne1Q61457 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccne1Q61457 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccne1Q61457 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccne1Q61457 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Gm18307-201ENSMUST00000206864 949 ntBASIC18.57■□□□□ 0.56
Ccne1Q61457 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccne1Q61457 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccne1Q61457 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccne1Q61457 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccne1Q61457 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccne1Q61457 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccne1Q61457 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms