Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.09■□□□□ 0.17
PER3P56645 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.09■□□□□ 0.17
PER3P56645 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.09■□□□□ 0.17
PER3P56645 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.09■□□□□ 0.17
PER3P56645 AC021087.4-201ENST00000563761 564 ntBASIC16.09■□□□□ 0.17
PER3P56645 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 AC055717.3-201ENST00000622967 595 ntBASIC16.09■□□□□ 0.17
PER3P56645 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.09■□□□□ 0.17
PER3P56645 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PER3P56645 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PER3P56645 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 GMCL1P1-201ENST00000463439 1581 ntBASIC16.09■□□□□ 0.17
PER3P56645 AC134043.2-201ENST00000624206 2238 ntBASIC16.09■□□□□ 0.17
PER3P56645 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PER3P56645 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.08■□□□□ 0.17
PER3P56645 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PER3P56645 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.08■□□□□ 0.17
PER3P56645 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PER3P56645 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PER3P56645 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.08■□□□□ 0.17
PER3P56645 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.08■□□□□ 0.17
PER3P56645 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PER3P56645 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 YBX2P1-201ENST00000394192 760 ntBASIC16.08■□□□□ 0.16
PER3P56645 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 RPS2P1-201ENST00000434010 821 ntBASIC16.08■□□□□ 0.16
PER3P56645 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.08■□□□□ 0.16
PER3P56645 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 AC002347.1-201ENST00000569543 541 ntBASIC16.08■□□□□ 0.16
PER3P56645 AC027796.2-201ENST00000575326 344 ntBASIC16.08■□□□□ 0.16
PER3P56645 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 AC009154.2-201ENST00000621177 724 ntBASIC16.08■□□□□ 0.16
PER3P56645 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 AL139288.1-201ENST00000623748 933 ntBASIC16.08■□□□□ 0.16
PER3P56645 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 AP005117.1-201ENST00000584346 1413 ntBASIC16.08■□□□□ 0.16
PER3P56645 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.08■□□□□ 0.16
PER3P56645 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 AL162727.3-201ENST00000635661 2787 ntBASIC16.08■□□□□ 0.16
PER3P56645 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PER3P56645 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.08■□□□□ 0.16
PER3P56645 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 OR6D1P-203ENST00000641209 4860 ntBASIC16.07■□□□□ 0.16
PER3P56645 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.07■□□□□ 0.16
PER3P56645 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PER3P56645 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.07■□□□□ 0.16
PER3P56645 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PER3P56645 ABCD1P5-201ENST00000445663 754 ntBASIC16.07■□□□□ 0.16
PER3P56645 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.07■□□□□ 0.16
PER3P56645 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.07■□□□□ 0.16
PER3P56645 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.07■□□□□ 0.16
PER3P56645 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms