Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LtbrP50284 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LtbrP50284 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Gm17420-201ENSMUST00000164753 153 ntBASIC16.84■□□□□ 0.29
LtbrP50284 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LtbrP50284 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.84■□□□□ 0.29
LtbrP50284 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.84■□□□□ 0.29
LtbrP50284 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LtbrP50284 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.84■□□□□ 0.29
LtbrP50284 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.84■□□□□ 0.29
LtbrP50284 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.83■□□□□ 0.29
LtbrP50284 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
LtbrP50284 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LtbrP50284 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LtbrP50284 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LtbrP50284 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
LtbrP50284 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LtbrP50284 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.83■□□□□ 0.28
LtbrP50284 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LtbrP50284 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.83■□□□□ 0.28
LtbrP50284 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.83■□□□□ 0.28
LtbrP50284 Gm45453-201ENSMUST00000211758 853 ntBASIC16.83■□□□□ 0.28
LtbrP50284 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LtbrP50284 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
LtbrP50284 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.83■□□□□ 0.28
LtbrP50284 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LtbrP50284 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LtbrP50284 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.82■□□□□ 0.28
LtbrP50284 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
LtbrP50284 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Gm12341-201ENSMUST00000119724 503 ntBASIC16.82■□□□□ 0.28
LtbrP50284 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.82■□□□□ 0.28
LtbrP50284 Gm20614-201ENSMUST00000177106 632 ntBASIC16.82■□□□□ 0.28
LtbrP50284 Gm27839-201ENSMUST00000184242 106 ntBASIC16.82■□□□□ 0.28
LtbrP50284 Gm37424-201ENSMUST00000191727 561 ntBASIC16.82■□□□□ 0.28
LtbrP50284 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LtbrP50284 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LtbrP50284 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.82■□□□□ 0.28
LtbrP50284 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
LtbrP50284 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LtbrP50284 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.81■□□□□ 0.28
LtbrP50284 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.81■□□□□ 0.28
LtbrP50284 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LtbrP50284 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LtbrP50284 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.81■□□□□ 0.28
LtbrP50284 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LtbrP50284 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LtbrP50284 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LtbrP50284 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LtbrP50284 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LtbrP50284 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms