Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Gm6222-201ENSMUST00000120787 396 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Gm27839-201ENSMUST00000184242 106 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Mir6392-201ENSMUST00000184924 108 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Gm16476-201ENSMUST00000221544 139 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 AC124408.1-201ENSMUST00000228938 707 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Mir433-201ENSMUST00000093564 124 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.26□□□□□ -0.13
Hoxb3P09026 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxb3P09026 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxb3P09026 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.25□□□□□ -0.13
Hoxb3P09026 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.25□□□□□ -0.13
Hoxb3P09026 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hoxb3P09026 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hoxb3P09026 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Gm14660-201ENSMUST00000119809 575 ntBASIC14.25□□□□□ -0.13
Hoxb3P09026 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb3P09026 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.25□□□□□ -0.13
Hoxb3P09026 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.25□□□□□ -0.13
Hoxb3P09026 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxb3P09026 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxb3P09026 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.24□□□□□ -0.13
Hoxb3P09026 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxb3P09026 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.24□□□□□ -0.13
Hoxb3P09026 Gm22334-201ENSMUST00000158070 133 ntBASIC14.24□□□□□ -0.13
Hoxb3P09026 Gm37986-201ENSMUST00000193285 383 ntBASIC14.24□□□□□ -0.13
Hoxb3P09026 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.24□□□□□ -0.13
Hoxb3P09026 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxb3P09026 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxb3P09026 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Hoxb3P09026 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxb3P09026 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxb3P09026 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxb3P09026 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxb3P09026 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.23□□□□□ -0.13
Hoxb3P09026 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hoxb3P09026 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms