Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.44■□□□□ 0.22
Stag2O35638 Gm15487-201ENSMUST00000122373 465 ntBASIC16.44■□□□□ 0.22
Stag2O35638 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Stag2O35638 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.44■□□□□ 0.22
Stag2O35638 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.44■□□□□ 0.22
Stag2O35638 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Stag2O35638 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Stag2O35638 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag2O35638 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.43■□□□□ 0.22
Stag2O35638 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Stag2O35638 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Stag2O35638 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Gm15653-201ENSMUST00000119247 907 ntBASIC16.43■□□□□ 0.22
Stag2O35638 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.43■□□□□ 0.22
Stag2O35638 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Gm6916-202ENSMUST00000205523 195 ntBASIC16.43■□□□□ 0.22
Stag2O35638 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.43■□□□□ 0.22
Stag2O35638 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Stag2O35638 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Stag2O35638 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Stag2O35638 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag2O35638 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.43■□□□□ 0.22
Stag2O35638 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.42■□□□□ 0.22
Stag2O35638 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Stag2O35638 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.42■□□□□ 0.22
Stag2O35638 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.42■□□□□ 0.22
Stag2O35638 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.42■□□□□ 0.22
Stag2O35638 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.42■□□□□ 0.22
Stag2O35638 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag2O35638 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Stag2O35638 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Stag2O35638 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.41■□□□□ 0.22
Stag2O35638 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Mir8102-201ENSMUST00000184148 139 ntBASIC16.41■□□□□ 0.22
Stag2O35638 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.41■□□□□ 0.22
Stag2O35638 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Stag2O35638 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Stag2O35638 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag2O35638 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms