Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.11□□□□□ -0.31
Shisa8J3QNX5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gm17807-201ENSMUST00000186869 298 ntBASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gm45167-201ENSMUST00000208007 322 ntBASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shisa8J3QNX5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shisa8J3QNX5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shisa8J3QNX5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms