Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pfdn5Q9WU28 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn5Q9WU28 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms