Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf3Q99LI7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf3Q99LI7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Mir8117-201ENSMUST00000184773 107 ntBASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Gm5364-201ENSMUST00000216789 889 ntBASIC13.91□□□□□ -0.18
Cstf3Q99LI7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf3Q99LI7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms