Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 KRT17P6-201ENST00000453795 1220 ntBASIC16.43■□□□□ 0.22
COL21A1Q96P44 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.42■□□□□ 0.22
COL21A1Q96P44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 AC074051.2-201ENST00000565115 352 ntBASIC16.42■□□□□ 0.22
COL21A1Q96P44 AC012615.1-201ENST00000565797 1299 ntBASIC16.42■□□□□ 0.22
COL21A1Q96P44 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COL21A1Q96P44 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL21A1Q96P44 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 MINOS1P3-201ENST00000457048 203 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 AC091607.1-201ENST00000490318 1060 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 AC104819.1-201ENST00000504587 486 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 AP005901.3-202ENST00000581653 237 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 AC005336.2-201ENST00000593183 939 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 AC018695.7-201ENST00000624587 2492 ntBASIC16.41■□□□□ 0.22
COL21A1Q96P44 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL21A1Q96P44 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.41■□□□□ 0.22
COL21A1Q96P44 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms