Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RNPS1P1-201ENST00000507437 918 ntBASIC20.62■□□□□ 0.89
DDX11Q96FC9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DDX11Q96FC9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
DDX11Q96FC9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 INTS4P1-201ENST00000438455 1935 ntBASIC20.61■□□□□ 0.89
DDX11Q96FC9 AC010460.3-201ENST00000511359 1579 ntBASIC20.61■□□□□ 0.89
DDX11Q96FC9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 BX276092.7-203ENST00000637198 1536 ntBASIC20.61■□□□□ 0.89
DDX11Q96FC9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 AC125634.1-201ENST00000438758 1403 ntBASIC20.61■□□□□ 0.89
DDX11Q96FC9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DDX11Q96FC9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX11Q96FC9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 PMS2P1-201ENST00000431037 1228 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 FGFR3P6-201ENST00000457012 610 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 SCARNA2-201ENST00000458748 420 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 AC011467.2-201ENST00000598425 242 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 AL671883.3-201ENST00000603274 991 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 AP001269.4-201ENST00000609611 512 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.6■□□□□ 0.89
DDX11Q96FC9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX11Q96FC9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX11Q96FC9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 MIR574-201ENST00000385209 96 ntBASIC20.59■□□□□ 0.89
DDX11Q96FC9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 AC006538.3-201ENST00000612495 578 ntBASIC20.59■□□□□ 0.89
DDX11Q96FC9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms