Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXRED1Q96CU9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 RNF152P1-201ENST00000397754 604 ntBASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 AL590326.2-201ENST00000625139 305 ntBASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 AC105020.1-201ENST00000435356 2205 ntBASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXRED1Q96CU9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 MYCLP1-201ENST00000372451 1075 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 HOMER2P1-201ENST00000455653 964 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 YBX1P2-201ENST00000489612 999 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 UBALD1-205ENST00000590891 2641 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 PCDHA14-201ENST00000506751 2298 ntBASIC15.12■□□□□ 0.01
FOXRED1Q96CU9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms