Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm13823-201ENSMUST00000119930 345 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm25144-201ENSMUST00000179561 110 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm25352-201ENSMUST00000179815 110 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Gm27989-201ENSMUST00000184721 107 ntBASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ndc1Q8VCB1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ndc1Q8VCB1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm12428-201ENSMUST00000119844 727 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm27306-201ENSMUST00000183970 107 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ndc1Q8VCB1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.57□□□□□ -0.24
Ndc1Q8VCB1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms