Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm44335-201ENSMUST00000196879 141 ntBASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm44297-201ENSMUST00000198304 141 ntBASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm44346-201ENSMUST00000198851 141 ntBASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim9Q8C7M3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Gm43125-201ENSMUST00000201724 730 ntBASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim9Q8C7M3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm12882-201ENSMUST00000121696 517 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Chchd1-203ENSMUST00000224633 557 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms