Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm13365-201ENSMUST00000121188 973 ntBASIC15.02■□□□□ -0
Sh3rf3Q8C120 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.02■□□□□ -0
Sh3rf3Q8C120 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.02■□□□□ -0
Sh3rf3Q8C120 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.02□□□□□ -0.01
Sh3rf3Q8C120 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sh3rf3Q8C120 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gm9252-201ENSMUST00000172364 1602 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gm12017-201ENSMUST00000122453 1003 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gm18057-201ENSMUST00000208220 503 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Mmp14-206ENSMUST00000225641 3238 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms