Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccne1Q61457 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccne1Q61457 Gm9002-201ENSMUST00000178437 499 ntBASIC18.63■□□□□ 0.57
Ccne1Q61457 Gm4804-201ENSMUST00000182234 999 ntBASIC18.63■□□□□ 0.57
Ccne1Q61457 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.63■□□□□ 0.57
Ccne1Q61457 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.63■□□□□ 0.57
Ccne1Q61457 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccne1Q61457 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccne1Q61457 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccne1Q61457 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.62■□□□□ 0.57
Ccne1Q61457 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccne1Q61457 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccne1Q61457 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.62■□□□□ 0.57
Ccne1Q61457 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.62■□□□□ 0.57
Ccne1Q61457 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccne1Q61457 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccne1Q61457 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Ccne1Q61457 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccne1Q61457 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.61■□□□□ 0.57
Ccne1Q61457 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccne1Q61457 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccne1Q61457 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.61■□□□□ 0.57
Ccne1Q61457 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Gm18062-201ENSMUST00000208020 547 ntBASIC18.6■□□□□ 0.57
Ccne1Q61457 Gm18055-201ENSMUST00000208254 547 ntBASIC18.6■□□□□ 0.57
Ccne1Q61457 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.6■□□□□ 0.57
Ccne1Q61457 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccne1Q61457 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccne1Q61457 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ccne1Q61457 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccne1Q61457 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms