Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.1■□□□□ 0.01
Cul4aQ3TCH7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cul4aQ3TCH7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cul4aQ3TCH7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm14140-201ENSMUST00000119999 995 ntBASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.08■□□□□ 0
Cul4aQ3TCH7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Cul4aQ3TCH7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms