Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cdh6P97326 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cdh6P97326 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh6P97326 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cdh6P97326 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Cdh6P97326 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh6P97326 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh6P97326 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Mir449b-201ENSMUST00000104833 80 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Gm14701-201ENSMUST00000117156 348 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Gm7774-201ENSMUST00000200064 533 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.59□□□□□ -0.07
Cdh6P97326 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.59□□□□□ -0.07
Cdh6P97326 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh6P97326 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh6P97326 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.58□□□□□ -0.07
Cdh6P97326 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh6P97326 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh6P97326 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh6P97326 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cdh6P97326 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cdh6P97326 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh6P97326 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh6P97326 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh6P97326 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh6P97326 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh6P97326 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdh6P97326 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.57□□□□□ -0.08
Cdh6P97326 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdh6P97326 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdh6P97326 Gm13823-201ENSMUST00000119930 345 ntBASIC14.57□□□□□ -0.08
Cdh6P97326 Gm6222-201ENSMUST00000120787 396 ntBASIC14.57□□□□□ -0.08
Cdh6P97326 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdh6P97326 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdh6P97326 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh6P97326 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms