Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.28□□□□□ -0.12
Atxn1P54254 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.28□□□□□ -0.12
Atxn1P54254 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Atxn1P54254 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.28□□□□□ -0.12
Atxn1P54254 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Atxn1P54254 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atxn1P54254 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Atxn1P54254 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.27□□□□□ -0.12
Atxn1P54254 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Atxn1P54254 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.27□□□□□ -0.12
Atxn1P54254 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Atxn1P54254 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.27□□□□□ -0.12
Atxn1P54254 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Atxn1P54254 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Atxn1P54254 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Atxn1P54254 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Atxn1P54254 Gm3436-201ENSMUST00000179930 840 ntBASIC14.27□□□□□ -0.13
Atxn1P54254 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Gm10766-202ENSMUST00000194123 606 ntBASIC14.27□□□□□ -0.13
Atxn1P54254 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.27□□□□□ -0.13
Atxn1P54254 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.27□□□□□ -0.13
Atxn1P54254 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.27□□□□□ -0.13
Atxn1P54254 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Atxn1P54254 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Atxn1P54254 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Atxn1P54254 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.26□□□□□ -0.13
Atxn1P54254 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.26□□□□□ -0.13
Atxn1P54254 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Atxn1P54254 Gm28760-201ENSMUST00000185995 736 ntBASIC14.26□□□□□ -0.13
Atxn1P54254 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.26□□□□□ -0.13
Atxn1P54254 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.26□□□□□ -0.13
Atxn1P54254 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Atxn1P54254 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Atxn1P54254 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Atxn1P54254 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms