Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2B1P20020 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ATP2B1P20020 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2B1P20020 AC002558.1-201ENST00000488906 803 ntBASIC20.02■□□□□ 0.8
ATP2B1P20020 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2B1P20020 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.02■□□□□ 0.8
ATP2B1P20020 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.02■□□□□ 0.8
ATP2B1P20020 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP2B1P20020 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP2B1P20020 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2B1P20020 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2B1P20020 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ATP2B1P20020 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2B1P20020 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2B1P20020 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP2B1P20020 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ATP2B1P20020 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP2B1P20020 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP2B1P20020 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ATP2B1P20020 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 FOSL1P1-201ENST00000511041 816 ntBASIC20.01■□□□□ 0.79
ATP2B1P20020 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP2B1P20020 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.01■□□□□ 0.79
ATP2B1P20020 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP2B1P20020 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP2B1P20020 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP2B1P20020 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP2B1P20020 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2B1P20020 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2B1P20020 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20■□□□□ 0.79
ATP2B1P20020 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20■□□□□ 0.79
ATP2B1P20020 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20■□□□□ 0.79
ATP2B1P20020 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ATP2B1P20020 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20■□□□□ 0.79
ATP2B1P20020 AC103564.2-201ENST00000432853 1299 ntBASIC20■□□□□ 0.79
ATP2B1P20020 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20■□□□□ 0.79
ATP2B1P20020 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20■□□□□ 0.79
ATP2B1P20020 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ATP2B1P20020 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ATP2B1P20020 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20■□□□□ 0.79
ATP2B1P20020 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20■□□□□ 0.79
ATP2B1P20020 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ATP2B1P20020 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20■□□□□ 0.79
ATP2B1P20020 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 INTS4P1-201ENST00000438455 1935 ntBASIC20■□□□□ 0.79
ATP2B1P20020 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2B1P20020 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2B1P20020 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ATP2B1P20020 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2B1P20020 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2B1P20020 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ATP2B1P20020 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP2B1P20020 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ATP2B1P20020 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP2B1P20020 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2B1P20020 AC111152.3-201ENST00000569699 673 ntBASIC19.99■□□□□ 0.79
ATP2B1P20020 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ATP2B1P20020 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2B1P20020 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2B1P20020 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ATP2B1P20020 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms