Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm26039-201ENSMUST00000158152 144 ntBASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc9Q8VC31 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Gm45053-201ENSMUST00000206112 2499 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Gm18101-201ENSMUST00000215769 548 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Gm9987-201ENSMUST00000069768 567 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc9Q8VC31 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Gm18032-201ENSMUST00000222541 538 ntBASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc9Q8VC31 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Gm22697-201ENSMUST00000175194 63 ntBASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Gm44450-201ENSMUST00000199528 114 ntBASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Gm20554-201ENSMUST00000177421 2352 ntBASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc9Q8VC31 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc9Q8VC31 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms