Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim68Q8K243 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.68■□□□□ 0.1
Trim68Q8K243 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim68Q8K243 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim68Q8K243 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Gm15321-201ENSMUST00000121290 288 ntBASIC15.67■□□□□ 0.1
Trim68Q8K243 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim68Q8K243 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim68Q8K243 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm6912-201ENSMUST00000117218 544 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm23984-201ENSMUST00000157139 203 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm6745-201ENSMUST00000199216 526 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm25857-201ENSMUST00000082788 129 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim68Q8K243 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim68Q8K243 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.66■□□□□ 0.1
Trim68Q8K243 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.65■□□□□ 0.1
Trim68Q8K243 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.65■□□□□ 0.1
Trim68Q8K243 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim68Q8K243 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim68Q8K243 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.65■□□□□ 0.1
Trim68Q8K243 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim68Q8K243 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim68Q8K243 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms