Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox21Q811W0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.83□□□□□ -0.52
Sox21Q811W0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sox21Q811W0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox21Q811W0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.82□□□□□ -0.52
Sox21Q811W0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox21Q811W0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox21Q811W0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.81□□□□□ -0.52
Sox21Q811W0 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.81□□□□□ -0.52
Sox21Q811W0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.81□□□□□ -0.52
Sox21Q811W0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox21Q811W0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox21Q811W0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox21Q811W0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms