Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm9063-201ENSMUST00000223299 582 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Shd-206ENSMUST00000225145 998 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdh19Q80TF3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 AA619741-201ENSMUST00000195095 646 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh19Q80TF3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Gm16476-201ENSMUST00000221544 139 ntBASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms