Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh8Q7TSK3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
Pcdh8Q7TSK3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Gm44344-201ENSMUST00000200287 129 ntBASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh8Q7TSK3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms