Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim12Q78RX3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim12Q78RX3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm13036-201ENSMUST00000117799 748 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm8584-201ENSMUST00000171982 758 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim12Q78RX3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.14□□□□□ -0.47
Smim12Q78RX3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim12Q78RX3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.13□□□□□ -0.47
Smim12Q78RX3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.13□□□□□ -0.47
Smim12Q78RX3 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.13□□□□□ -0.47
Smim12Q78RX3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.13□□□□□ -0.47
Smim12Q78RX3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim12Q78RX3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.12□□□□□ -0.47
Smim12Q78RX3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.12□□□□□ -0.47
Smim12Q78RX3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.12□□□□□ -0.47
Smim12Q78RX3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim12Q78RX3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms