Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gm37641-201ENSMUST00000193837 239 ntBASIC10.69□□□□□ -0.7
Foxc1Q61572 Gm6649-201ENSMUST00000199743 1165 ntBASIC10.69□□□□□ -0.7
Foxc1Q61572 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Celf4-206ENSMUST00000224553 1729 ntBASIC10.69□□□□□ -0.7
Foxc1Q61572 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Foxc1Q61572 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Foxc1Q61572 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.68□□□□□ -0.7
Foxc1Q61572 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Mir1895-201ENSMUST00000122615 79 ntBASIC10.68□□□□□ -0.7
Foxc1Q61572 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Gm43767-201ENSMUST00000198933 381 ntBASIC10.68□□□□□ -0.7
Foxc1Q61572 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Foxc1Q61572 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Foxc1Q61572 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.67□□□□□ -0.7
Foxc1Q61572 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.67□□□□□ -0.7
Foxc1Q61572 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm15920-201ENSMUST00000118998 402 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms