Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SRGAP3O43295 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.55■■□□□ 1.04
SRGAP3O43295 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.55■■□□□ 1.04
SRGAP3O43295 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.55■■□□□ 1.04
SRGAP3O43295 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.55■■□□□ 1.04
SRGAP3O43295 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
SRGAP3O43295 AC006557.2-201ENST00000592985 1240 ntBASIC21.55■■□□□ 1.04
SRGAP3O43295 AL353135.1-201ENST00000606729 504 ntBASIC21.55■■□□□ 1.04
SRGAP3O43295 AL139424.1-201ENST00000607572 797 ntBASIC21.55■■□□□ 1.04
SRGAP3O43295 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SRGAP3O43295 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 AP002414.3-201ENST00000589352 1468 ntBASIC21.55■■□□□ 1.04
SRGAP3O43295 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.55■■□□□ 1.04
SRGAP3O43295 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 AC016396.2-201ENST00000562575 1417 ntBASIC21.55■■□□□ 1.04
SRGAP3O43295 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRGAP3O43295 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.54■■□□□ 1.04
SRGAP3O43295 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 AC026471.1-201ENST00000564629 3026 ntBASIC21.54■■□□□ 1.04
SRGAP3O43295 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SRGAP3O43295 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.54■■□□□ 1.04
SRGAP3O43295 AC006504.4-201ENST00000592118 1568 ntBASIC21.54■■□□□ 1.04
SRGAP3O43295 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.54■■□□□ 1.04
SRGAP3O43295 AC105339.3-201ENST00000560043 636 ntBASIC21.54■■□□□ 1.04
SRGAP3O43295 AC116407.3-201ENST00000623905 1129 ntBASIC21.54■■□□□ 1.04
SRGAP3O43295 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SRGAP3O43295 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRGAP3O43295 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRGAP3O43295 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.53■■□□□ 1.04
SRGAP3O43295 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.53■■□□□ 1.04
SRGAP3O43295 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 AC073621.1-201ENST00000392730 636 ntBASIC21.53■■□□□ 1.04
SRGAP3O43295 ELK2BP-201ENST00000415014 1224 ntBASIC21.53■■□□□ 1.04
SRGAP3O43295 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SRGAP3O43295 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.53■■□□□ 1.04
SRGAP3O43295 AC093909.1-201ENST00000504731 1122 ntBASIC21.53■■□□□ 1.04
SRGAP3O43295 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.53■■□□□ 1.04
SRGAP3O43295 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SRGAP3O43295 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
SRGAP3O43295 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SRGAP3O43295 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SRGAP3O43295 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRGAP3O43295 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.53■■□□□ 1.04
SRGAP3O43295 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.52■■□□□ 1.04
SRGAP3O43295 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SRGAP3O43295 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SRGAP3O43295 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SRGAP3O43295 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.52■■□□□ 1.04
SRGAP3O43295 AC092910.1-201ENST00000482027 1129 ntBASIC21.52■■□□□ 1.04
SRGAP3O43295 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.52■■□□□ 1.04
SRGAP3O43295 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.52■■□□□ 1.04
SRGAP3O43295 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms