Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7n-4A0A075B620 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Rprl3-201ENSMUST00000157400 290 ntBASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7n-4A0A075B620 Gm44454-201ENSMUST00000198541 138 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms