Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 AC246785.2-201ENST00000432512 513 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 TPSP2-201ENST00000561760 610 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 MIR3180-1-201ENST00000580374 94 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 MIR3180-3-201ENST00000584616 94 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 AC092329.2-201ENST00000598402 547 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 AL353801.3-201ENST00000609898 542 ntBASIC16.48■□□□□ 0.23
COL21A1Q96P44 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
COL21A1Q96P44 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.47■□□□□ 0.23
COL21A1Q96P44 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 LINC00265-3P-201ENST00000447588 903 ntBASIC16.47■□□□□ 0.23
COL21A1Q96P44 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 Z69720.1-201ENST00000601483 472 ntBASIC16.47■□□□□ 0.23
COL21A1Q96P44 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.47■□□□□ 0.23
COL21A1Q96P44 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL21A1Q96P44 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.47■□□□□ 0.23
COL21A1Q96P44 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 AL845331.1-201ENST00000424978 1190 ntBASIC16.46■□□□□ 0.23
COL21A1Q96P44 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 TOB2P1-201ENST00000469761 992 ntBASIC16.46■□□□□ 0.23
COL21A1Q96P44 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 AC233702.3-201ENST00000578656 1387 ntBASIC16.46■□□□□ 0.23
COL21A1Q96P44 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL21A1Q96P44 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.46■□□□□ 0.23
COL21A1Q96P44 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
COL21A1Q96P44 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.46■□□□□ 0.22
COL21A1Q96P44 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms