Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm45098-201ENSMUST00000207179 657 ntBASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm1Q8VC85 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Gm9385-201ENSMUST00000117563 472 ntBASIC13.86□□□□□ -0.19
Lsm1Q8VC85 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Gm17968-201ENSMUST00000194902 784 ntBASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Gm45747-201ENSMUST00000212203 999 ntBASIC13.86□□□□□ -0.19
Lsm1Q8VC85 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm1Q8VC85 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm14140-201ENSMUST00000119999 995 ntBASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm1Q8VC85 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms