Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Gm7889-201ENSMUST00000185591 958 ntBASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim2Q8R1G6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm44454-201ENSMUST00000198541 138 ntBASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim2Q8R1G6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Gm22697-201ENSMUST00000175194 63 ntBASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim2Q8R1G6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim2Q8R1G6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim2Q8R1G6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim2Q8R1G6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pdlim2Q8R1G6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim2Q8R1G6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms