Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST2Q8NFU1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 ELK2BP-201ENST00000415014 1224 ntBASIC18.71■□□□□ 0.59
BEST2Q8NFU1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 AL353135.1-201ENST00000606729 504 ntBASIC18.71■□□□□ 0.59
BEST2Q8NFU1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 AC117500.6-201ENST00000624871 588 ntBASIC18.71■□□□□ 0.59
BEST2Q8NFU1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST2Q8NFU1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
BEST2Q8NFU1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 AC006504.4-201ENST00000592118 1568 ntBASIC18.7■□□□□ 0.58
BEST2Q8NFU1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST2Q8NFU1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 RNA5SP415-201ENST00000517246 115 ntBASIC18.69■□□□□ 0.58
BEST2Q8NFU1 KRT18P58-201ENST00000527480 1120 ntBASIC18.69■□□□□ 0.58
BEST2Q8NFU1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST2Q8NFU1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 ZNF259P1-201ENST00000407656 1365 ntBASIC18.68■□□□□ 0.58
BEST2Q8NFU1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms