Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox30Q8CGW4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Gm12882-201ENSMUST00000121696 517 ntBASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox30Q8CGW4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox30Q8CGW4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.77■□□□□ 0.11
Sox30Q8CGW4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox30Q8CGW4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox30Q8CGW4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox30Q8CGW4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Gm9385-201ENSMUST00000117563 472 ntBASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Gm7977-201ENSMUST00000193787 748 ntBASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox30Q8CGW4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm15483-201ENSMUST00000120338 456 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm17971-201ENSMUST00000190239 806 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox30Q8CGW4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox30Q8CGW4 Gm11452-201ENSMUST00000122376 690 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms