Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AL359075.1-203ENST00000462729 1002 ntBASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC112698.1-201ENST00000510299 916 ntBASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 KRT8P47-201ENST00000604727 1398 ntBASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 IGHGP-201ENST00000390555 1178 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AC092647.4-201ENST00000457211 535 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 GPR32P1-201ENST00000601788 811 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AC097493.4-201ENST00000641197 219 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 CROCCP2-202ENST00000412962 2773 ntBASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
MRPL55Q7Z7F7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL55Q7Z7F7 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms