Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SgcbP82349 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SgcbP82349 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SgcbP82349 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SgcbP82349 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SgcbP82349 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.9□□□□□ -0.34
SgcbP82349 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SgcbP82349 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SgcbP82349 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SgcbP82349 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.9□□□□□ -0.34
SgcbP82349 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
SgcbP82349 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Olfr286-202ENSMUST00000205305 969 ntBASIC12.9□□□□□ -0.34
SgcbP82349 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.9□□□□□ -0.34
SgcbP82349 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.9□□□□□ -0.34
SgcbP82349 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.9□□□□□ -0.34
SgcbP82349 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SgcbP82349 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
SgcbP82349 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SgcbP82349 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SgcbP82349 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.89□□□□□ -0.35
SgcbP82349 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.89□□□□□ -0.35
SgcbP82349 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.89□□□□□ -0.35
SgcbP82349 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SgcbP82349 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SgcbP82349 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.89□□□□□ -0.35
SgcbP82349 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.89□□□□□ -0.35
SgcbP82349 Gm25948-201ENSMUST00000175334 112 ntBASIC12.89□□□□□ -0.35
SgcbP82349 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.89□□□□□ -0.35
SgcbP82349 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.89□□□□□ -0.35
SgcbP82349 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.89□□□□□ -0.35
SgcbP82349 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.89□□□□□ -0.35
SgcbP82349 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.89□□□□□ -0.35
SgcbP82349 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SgcbP82349 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SgcbP82349 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcbP82349 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
SgcbP82349 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SgcbP82349 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcbP82349 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.88□□□□□ -0.35
SgcbP82349 Gm8410-201ENSMUST00000117225 605 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Gm13616-201ENSMUST00000120600 222 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.88□□□□□ -0.35
SgcbP82349 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.88□□□□□ -0.35
SgcbP82349 Gm5779-201ENSMUST00000218467 910 ntBASIC12.88□□□□□ -0.35
SgcbP82349 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms