Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 MIR940-201ENST00000401276 94 ntBASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC33Q8N5R6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC018712.1-201ENST00000455767 687 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 POLD2P1-201ENST00000511220 997 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC009533.2-201ENST00000543664 586 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 MIR7706-201ENST00000613747 67 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC117500.6-201ENST00000624871 588 ntBASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC33Q8N5R6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 AC141586.5-201ENST00000624546 2050 ntBASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC33Q8N5R6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms