Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc46a1Q6PEM8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Gm29541-201ENSMUST00000191351 678 ntBASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.76□□□□□ -0.37
Slc46a1Q6PEM8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm18766-201ENSMUST00000189811 808 ntBASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Efs-202ENSMUST00000227037 2540 ntBASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc46a1Q6PEM8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms