Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Six4Q61321 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Six4Q61321 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.62□□□□□ -0.07
Six4Q61321 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Six4Q61321 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Six4Q61321 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.62□□□□□ -0.07
Six4Q61321 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Gm10253-201ENSMUST00000194270 940 ntBASIC14.62□□□□□ -0.07
Six4Q61321 Gm7774-201ENSMUST00000200064 533 ntBASIC14.62□□□□□ -0.07
Six4Q61321 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Six4Q61321 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Six4Q61321 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Six4Q61321 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.62□□□□□ -0.07
Six4Q61321 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Six4Q61321 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Six4Q61321 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Six4Q61321 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Gm25948-201ENSMUST00000175334 112 ntBASIC14.61□□□□□ -0.07
Six4Q61321 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.61□□□□□ -0.07
Six4Q61321 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Six4Q61321 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.61□□□□□ -0.07
Six4Q61321 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.61□□□□□ -0.07
Six4Q61321 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Six4Q61321 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Six4Q61321 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Six4Q61321 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.6□□□□□ -0.07
Six4Q61321 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.6□□□□□ -0.07
Six4Q61321 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.6□□□□□ -0.07
Six4Q61321 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.6□□□□□ -0.07
Six4Q61321 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.6□□□□□ -0.07
Six4Q61321 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Six4Q61321 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Six4Q61321 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Six4Q61321 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Six4Q61321 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.59□□□□□ -0.07
Six4Q61321 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.59□□□□□ -0.07
Six4Q61321 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.59□□□□□ -0.07
Six4Q61321 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.59□□□□□ -0.07
Six4Q61321 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.59□□□□□ -0.07
Six4Q61321 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Six4Q61321 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms