Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3-3Q5R1C3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm25927-201ENSMUST00000175058 117 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm27011-201ENSMUST00000182352 972 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gm10566-201ENSMUST00000086739 996 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.89□□□□□ -0.67
Trav3-3Q5R1C3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gm22697-201ENSMUST00000175194 63 ntBASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gm37722-201ENSMUST00000193757 208 ntBASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-3Q5R1C3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms