Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.11
Clk2O35491 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.71■□□□□ 0.11
Clk2O35491 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clk2O35491 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clk2O35491 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.71■□□□□ 0.11
Clk2O35491 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.71■□□□□ 0.11
Clk2O35491 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clk2O35491 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.71■□□□□ 0.1
Clk2O35491 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Clk2O35491 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Clk2O35491 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Clk2O35491 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clk2O35491 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.71■□□□□ 0.1
Clk2O35491 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Clk2O35491 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.7■□□□□ 0.1
Clk2O35491 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clk2O35491 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Gm16215-201ENSMUST00000161990 637 ntBASIC15.7■□□□□ 0.1
Clk2O35491 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.7■□□□□ 0.1
Clk2O35491 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Clk2O35491 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Clk2O35491 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Clk2O35491 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clk2O35491 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.7■□□□□ 0.1
Clk2O35491 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.69■□□□□ 0.1
Clk2O35491 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk2O35491 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk2O35491 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk2O35491 Gm15957-201ENSMUST00000118893 974 ntBASIC15.69■□□□□ 0.1
Clk2O35491 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Clk2O35491 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.69■□□□□ 0.1
Clk2O35491 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.69■□□□□ 0.1
Clk2O35491 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk2O35491 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clk2O35491 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Clk2O35491 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clk2O35491 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
Clk2O35491 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Clk2O35491 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.68■□□□□ 0.1
Clk2O35491 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.68■□□□□ 0.1
Clk2O35491 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk2O35491 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk2O35491 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms