Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.04■□□□□ 0.16
Q9CYI0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Q9CYI0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.04■□□□□ 0.16
Q9CYI0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.04■□□□□ 0.16
Q9CYI0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.04■□□□□ 0.16
Q9CYI0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.04■□□□□ 0.16
Q9CYI0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Q9CYI0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
Q9CYI0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q9CYI0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Q9CYI0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Q9CYI0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.03■□□□□ 0.16
Q9CYI0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.03■□□□□ 0.16
Q9CYI0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Q9CYI0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.03■□□□□ 0.16
Q9CYI0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.03■□□□□ 0.16
Q9CYI0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Q9CYI0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.03■□□□□ 0.16
Q9CYI0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q9CYI0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.02■□□□□ 0.16
Q9CYI0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Q9CYI0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Q9CYI0 Gm12428-201ENSMUST00000119844 727 ntBASIC16.02■□□□□ 0.16
Q9CYI0 Gm12151-201ENSMUST00000121374 290 ntBASIC16.02■□□□□ 0.16
Q9CYI0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.02■□□□□ 0.16
Q9CYI0 Mir7684-201ENSMUST00000183858 60 ntBASIC16.02■□□□□ 0.16
Q9CYI0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.02■□□□□ 0.16
Q9CYI0 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.02■□□□□ 0.16
Q9CYI0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.02■□□□□ 0.16
Q9CYI0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Q9CYI0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Q9CYI0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Q9CYI0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Q9CYI0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Q9CYI0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.02■□□□□ 0.15
Q9CYI0 Efs-202ENSMUST00000227037 2540 ntBASIC16.02■□□□□ 0.15
Q9CYI0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Q9CYI0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Q9CYI0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Q9CYI0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Q9CYI0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.01■□□□□ 0.15
Q9CYI0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Q9CYI0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Q9CYI0 Gm5566-201ENSMUST00000116118 459 ntBASIC16.01■□□□□ 0.15
Q9CYI0 Gm13823-201ENSMUST00000119930 345 ntBASIC16.01■□□□□ 0.15
Q9CYI0 Gm14767-201ENSMUST00000121559 586 ntBASIC16.01■□□□□ 0.15
Q9CYI0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms