Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh18Q8VHR0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh18Q8VHR0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh18Q8VHR0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh18Q8VHR0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Gm4535-201ENSMUST00000182274 558 ntBASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Gm6296-201ENSMUST00000222599 943 ntBASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Gm10355-201ENSMUST00000097146 517 ntBASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh18Q8VHR0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms